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View Structure Prediction Details

Protein: PUMP1_ARATH
Organism: Arabidopsis thaliana
Length: 306 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUMP1_ARATH.

Description E-value Query
Range
Subject
Range
gi|25295878, gi|... - gi|3115108|emb|CAA11757.1| plant uncoupling mitochondrial protein [Arabidopsis thaliana], pir||T5202...
291.0 [0..1] [306..1]

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Predicted Domain #1
Region A:
Residues: [1-306]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAAGKSDLS LPKTFACSAF AACVGEVCTI PLDTAKVRLQ LQKSALAGDV TLPKYRGLLG  60
   61 TVGTIAREEG LRSLWKGVVP GLHRQCLFGG LRIGMYEPVK NLYVGKDFVG DVPLSKKILA 120
  121 GLTTGALGIM VANPTDLVKV RLQAEGKLAA GAPRRYSGAL NAYSTIVRQE GVRALWTGLG 180
  181 PNVARNAIIN AAELASYDQV KETILKIPGF TDNVVTHILS GLGAGFFAVC IGSPVDVVKS 240
  241 RMMGDSGAYK GTIDCFVKTL KSDGPMAFYK GFIPNFGRLG SWNVIMFLTL EQAKKYVREL 300
  301 DASKRN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 73.522879
Match: 1okcA
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle