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View Structure Prediction Details

Protein: gi|11120808, gi|...
Organism: Arabidopsis thaliana
Length: 222 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11120808, gi|....

Description E-value Query
Range
Subject
Range
gi|7438249, gi|1... - pir||T03803 tumor-related protein, clone NF34 - common tobacco, gi|1762933|gb|AAC49969.1| tumor-rela...
224.0 [0..1] [204..1]

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Predicted Domain #1
Region A:
Residues: [1-222]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKLTLSFIT LTVLSAIFTA ASAADATPSQ VVLDIAGHPV QSNVQYYIIP AKIGTGGGLI  60
   61 PSNRNLSTQD LCLNLDIVQS SSPFVSGLPV TFSPLNTKVK HVQLSASLNL EFDSTVWLCP 120
  121 DSKVWRIDHS VQLRKSFVSI GGQKGKGNSW FQIQEDGDAY KLMYCPISSI VACINVSLEI 180
  181 DDHGVRRLVL STDQSFVVKF QKAYDSNSNC NLKSNSRMFL FL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.154902
Match: 1avuA
Description: TRYPSIN INHIBITOR FROM SOYBEAN (STI)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle