| Protein: | APC1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1678 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for APC1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
1227.0 | [0..59] | [1627..88] |
|
|
1205.0 | [0..59] | [1640..88] |
|
|
1203.0 | [0..59] | [1640..88] |
|
|
1201.0 | [0..59] | [1628..88] |
|
|
1148.0 | [0..59] | [1639..88] |
|
|
1117.0 | [0..59] | [1627..88] |
|
|
1032.0 | [0..37] | [1674..108] |
|
|
1029.0 | [0..51] | [1674..143] |
|
|
1002.0 | [0..74] | [1670..126] |
|
Region A: Residues: [1-97] |
1 11 21 31 41 51
| | | | | |
1 MPPGVRQLTV LGKFKPFGLI AEATDGKSPD DSYQYFLFDP ELTGERDDAD GNDANFSRQR 60
61 EHELFIRDNC NVRKGYALVE ANFIGYWYNA CWSNLGR
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [98-276] |
1 11 21 31 41 51
| | | | | |
1 GTEAFLCVLQ IACLTIYNTS GEVVSVPLMR TVKSIWPLPC GLLLEQAGEV NPPSHVPFSP 60
61 VSPILGSREM LRQRKEVGNS SPQNFHSPVA HDLISKRDMP CMSSHLILRD PLEEPGPTYV 120
121 EERGKLTIMK DYDERTIWTS DRLPLMTSYN KGKMQHSVWA AEFIESNLEA SASCSSGIV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [277-397] |
1 11 21 31 41 51
| | | | | |
1 PDAVLSKRVS FRRIWQAKGA KKAASKVFLA TDNSVPVICF LILEQKKLLS VGLQTVEINN 60
61 EILFDVKPDI SWSVSAIAAA PVVVTRSQVK IGLLPHLDII VLSPENDLFL YSGKQCLCRY 120
121 V
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [398-517] |
1 11 21 31 41 51
| | | | | |
1 LPSWLGESIG SGDGESAKTD SGFRNLKITG LSDAVLGSIN LSVNHSQIFR CALTGKPSSS 60
61 LANDCIAAIA EGLRSDLYSL FLSLLWGDGH SDLQGSSIHF EWEALCNIFL EICQKPTVVH 120
121
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [518-609] |
1 11 21 31 41 51
| | | | | |
1 RKQPKTASES SWEFLLISKF HKTYSRFHNG ITSINRLDLE GIVPFDSKIC SEETLGSSCE 60
61 LMVQSLDCLH AVYESLKMDN LRKQDLHHLA VL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [610-711] |
1 11 21 31 41 51
| | | | | |
1 LCNIAKFLDE KCYLDYYIRD FPRLSTTIGA CTTLSSSRKP PNLFRWLENC LRRGCLSTNF 60
61 DDLPDLIRRD GCSIVSWARK VVSFYSVLFG DKPEGRTLSS GV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [712-883] |
1 11 21 31 41 51
| | | | | |
1 PCNIAPGSYS CNEELTILAM AGERFGLHQL DLLPSGVSLP LRHALDSCRE SPPADWPAIA 60
61 YVLLGREDMA LSVFRNFSSS KEFEMQSNTS LISMSIPYML HLHPVIVPSS ESIGLENTKI 120
121 EDTNSVDGSV IDGMEHIFNS YTQLRYGRDL RLNEVRRLLC SARPVVVQTA AN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [884-1031] |
1 11 21 31 41 51
| | | | | |
1 PTISDQEQQQ AFTVPKLVLA GRLPSQQNAI VNLDPNIRNI QELKTWPEFH NAVAAGLRLA 60
61 PLQGKVSRTW IRYNKPGEPN AVHAGLLFGL GLQGYLHVLN LSDIYQYFTQ DHESTTVGLM 120
121 LGLAASYRGT MQPDIAKALF FHVPARYQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1032-1104] |
1 11 21 31 41 51
| | | | | |
1 ASYTEFEIPT LLQSAALVSV GMLFEGSAHQ QTMQLLLGEI GRRSAGDNVL EREGYAVSAG 60
61 FSLGLVALGR GGD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1105-1209] |
1 11 21 31 41 51
| | | | | |
1 ALGSMDSLVN RLLLYLGAKE ERSILVPSLE DHRSAAQITD GSTSNVDITA PGAIIALTLM 60
61 YLKTESEVIF SKLSIPQTHY DLECVRPDFI MLRVIARNLI MWSRI
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1210-1347] |
1 11 21 31 41 51
| | | | | |
1 CPTCDWIQSQ VPEVVKNGIS QLRDDMDNMY EVDVEALVQA YVNIVAGACI SLGLRFAGTR 60
61 DGNARDLLNS YALYLLNEIK PLSATPGNAF PRGISKFVDR GTLEMCLYLI IISLSVVMAG 120
121 SGDLQVFRLL RFLRSRNS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1348-1499] |
1 11 21 31 41 51
| | | | | |
1 ADGHANYGTQ MAVSLATGFL FLGGGMRTFS TNNGSLAMLL ITLYPRLPSG PNDNRCHLQA 60
61 FRHLYVLATE ARWLQTIDVD SGLPVYAPLE VTVKETKLYS ETKFCEITPC ILPERAILKR 120
121 ICVCGPRYWP QQIELVFGLR TLGESNLIAN SH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1500-1678] |
1 11 21 31 41 51
| | | | | |
1 RELDSDSVDH LVSTFSSDPS LIAFAQLCCD KSWNNSFDFL ILDLILWSQV ALAYNEAVST 60
61 GRLASSGGFV QSIFLASLRK RCEEVLNCST ELKINLRNYL TSEAWPYDKN SKLQKDIIIL 120
121 SWYLKWFNVP SPSIIKAAVE KIKSKSKNST SAIPLLRLLL PNTHISVIGE IDRVFFPSN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
