| Protein: | SYP24_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 416 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYP24_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
248.0 | [0..1] | [416..1] |
|
Region A: Residues: [1-92] |
1 11 21 31 41 51
| | | | | |
1 MVRSNDVKFQ VYDAELTHFD LESNNNLQYS LSLNLSIRNS KSSIGIHYDR FEATVYYMNQ 60
61 RLGAVPMPLF YLGSKNTMLL RALFEGQTLV LL
|
| Detection Method: |  |
| Confidence: | 1.64 |
| Match: | 1xo8A |
| Description: | Solution structure of AT1g01470 from Arabidopsis Thaliana |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [93-359] |
1 11 21 31 41 51
| | | | | |
1 KGNERKKFED DQKTGVYRID VKLSINFRVM VLHLVTWPMK PVVRCHLKIP LALGSSNSTG 60
61 GHKKMLLIGQ LVKDTSANLR EASETDHRRD VAQSKKIADA KLAKDFEAAL KEFQKAQHIT 120
121 VERETSYIPF DPKGSFSSSE VDIGYDRSQE QRVLMESRRQ EIVLLDNEIS LNEARIEARE 180
181 QGIQEVKHQI SEVMEMFKDL AVMVDHQGTI DDIDEKIDNL RSAAAQGKSH LVKASNTQGS 240
241 NSSLLFSCSL LLFFFLSGDL CRCVCVG
|
| Detection Method: | |
| Confidence: | 40.69897 |
| Match: | 1dn1B |
| Description: | Syntaxin 1A N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.068037611730119 | bayes_pls_golite062009 |
|
Region A: Residues: [360-416] |
1 11 21 31 41 51
| | | | | |
1 SENPRLNPTR RKAWCEEEDE EQRKKQQKKK TMSEKRRREE KKVNKPNGFV FCVLGHK
|
| Detection Method: | |
| Confidence: | 1.13 |
| Match: | 1f00I |
| Description: | Intimin |
Matching Structure (courtesy of the PDB): |
|
