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View Structure Prediction Details

Protein: gi|60547729, gi|...
Organism: Arabidopsis thaliana
Length: 393 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|60547729, gi|....

Description E-value Query
Range
Subject
Range
gi|46486680 - gi|46486680|gb|AAS98781.1| JamJ [Lyngbya majuscula]
385.0 [0..3] [393..1168]

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Predicted Domain #1
Region A:
Residues: [1-332]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSLLHRTIL LTSPSHSLIR RTSLSAMATT ASSSLLLPSI SLNNLSSSKN ASFGFAAKNL  60
   61 SRSRISMSVS AGSQSTTVHD SLFADYKPTS AFLFPGQGAQ AVGMGKESQS VGAAGELYKK 120
  121 ANDILGYDLL DICVNGPKEK LDSTVISQPA IYVTSLAAVE LLRVREGGEQ IINSVDVTCG 180
  181 LSLGEYTALA FAGAFSFEDG LKLVKLRGEA MQAAADAAKS AMVSIIGLDS EKVQQLCDAA 240
  241 NQEVDEADKV QIANYLCPGN YAVSGGLKGI EVVEAKAKSF KARMTVRLAV AGAFHTSFME 300
  301 PAVSRLEAAL AATEIRSPRI PVISNVDAQP HA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.0
Match: 2uv8G
Description: No description for 2uv8G was found.

Predicted Domain #2
Region A:
Residues: [333-393]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPDTIKKILA RQVTSPVQWE TTVKTLLSKG LKSSYELGPG KVIAGIFKRV DKSASFENIS  60
   61 A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.69897
Match: 1mlaA
Description: THE ESCHERICHIA COLI MALONYL-COA:ACYL CARRIER PROTEIN TRANSACYLASE AT 1.5-ANGSTROMS RESOLUTION. CRYSTAL STRUCTURE OF A FATTY ACID SYNTHASE COMPONENT
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle