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View Structure Prediction Details

Protein: FB340_ARATH
Organism: Arabidopsis thaliana
Length: 416 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FB340_ARATH.

Description E-value Query
Range
Subject
Range
FB167_ARATH - Putative F-box protein At3g20030 OS=Arabidopsis thaliana GN=At3g20030 PE=4 SV=1
175.0 [0..40] [416..1]

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Predicted Domain #1
Region A:
Residues: [1-416]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRKYIYIYI YIILKVRARV GANNKTLINN QSHLIEMRNT LMLSDLPGDL LEEILCRVPA  60
   61 TSLKQLRSTC KQWNNLFNNG RFTRKHLDKA PKDFQNLMLS DSRVFSMSVS FHGIPSVEAT 120
  121 CELSLIDSFS SFEDKFEISQ VFHCDGLLLC TDADNTRIVV WNPCTGKTRW IEPNNRCYYY 180
  181 AFGSYLDKSY GNSYKILSYS GYGYENQELA IYEINSQSWR FLDVTRDCIL ERYTDYGVSL 240
  241 KGHTYWFASD EKEKNLSVFL VSFDYTTERF RRLRLPYQCP DYNTASLSVV REEKLAVLLQ 300
  301 RENTSRTEIW VTSRIGETKV VSWSMVLAVD FPSELFILSG ISFLVDAEKK FVVCCDNYFG 360
  361 EDEYDTKNLV HIVGENNKVR EVNFGVSESS WPFLFNYVPS LIQIWEGVGG KRKRVE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.69897
Match: 2ovpB
Description: No description for 2ovpB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle