YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: SUMO5_ARATH
Organism: Arabidopsis thaliana
Length: 108 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SUMO5_ARATH.

Description E-value Query
Range
Subject
Range
gi|5523967 - gi|5523967|gb|AAD44036.1|AF104019_1 polyprotein [Bovine viral diarrhea virus genotype 2]
153.0 [0..3] [105..169]

Back

Predicted Domain #1
Region A:
Residues: [1-108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSSTDTISA SFVSKKSRSP ETSPHMKVTL KVKNQQGAED LYKIGTHAHL KKLMSAYCTK  60
   61 RNLDYSSVRF VYNGREIKAR QTPAQLHMEE EDEICMVMEL GGGGPYTP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.0
Match: 1wz0A
Description: Solution Structure of Human SUMO-2 (SMT3B), a Ubiquitin-like Protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.2991525071751 bayes_pls_golite062009
protein binding 1.17286764835548 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle