| Protein: | RH24_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 760 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RH24_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
393.0 | [0..2] | [749..10] |
|
Region A: Residues: [1-173] |
1 11 21 31 41 51
| | | | | |
1 MSNRKFGMEG FGINRQTSYS FERSQAPQRL YVPPSSRGGD NSEDADLDNI DYMENEEAEE 60
61 DIEEGGSAAA SGGEVDEIDP LDAFMEGIHQ EMKSAPPPKP KEKLERYKDD DDDPVESYLK 120
121 AKKDLGLTLA ADALNAGYNS DEEVYAAAKA VDAGMLDYDS DDNPIVVDKR KIE
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [174-607] |
1 11 21 31 41 51
| | | | | |
1 PITALDHSSI DYEPINKDFY EELESISGMT EQETTDYRQR LGIRVSGFDV HRPVKTFEDC 60
61 GFSSQIMSAI KKQAYEKPTA IQCQALPIVL SGRDVIGIAK TGSGKTAAFV LPMIVHIMDQ 120
121 PELQRDEGPI GVICAPTREL AHQIFLEAKK FSKAYGLRVS AVYGGMSKHE QFKELKAGCE 180
181 IVVATPGRLI DMLKMKALTM MRASYLVLDE ADRMFDLGFE PQVRSIVGQI RPDRQTLLFS 240
241 ATMPWKVEKL AREILSDPIR VTVGEVGMAN EDITQVVNVI PSDAEKLPWL LEKLPGMIDE 300
301 GDVLVFASKK ATVDEIEAQL TLNSFKVAAL HGDKDQASRM ETLQKFKSGV HHVLIATDVA 360
361 ARGLDIKSLK TVVNYDIAKD MDMHVHRIGR TGRAGDRDGV AYTLVTQREA RFAGELVNSL 420
421 VAAGQNVPPE LTDL
|
| Detection Method: | |
| Confidence: | 85.0 |
| Match: | 2db3A |
| Description: | No description for 2db3A was found. |
|
Region A: Residues: [608-760] |
1 11 21 31 41 51
| | | | | |
1 AMKDGRFKSK RDGRKGGKKG RGGGGGNKGV RGVDFGLGIG FSSESSRTPS SKAAPSRSGA 60
61 INSVRTGVMA QFKNSFVAAT PSNPQNQAYP NKRPSLMGFV SGGTIGGDMG RTQSQAPPVA 120
121 PTQNASSHNS SQNHSQSSEN RPRERKRRSG WDN
|
| Detection Method: | |
| Confidence: | 15.39794 |
| Match: | 1d2mA |
| Description: | Nucleotide excision repair enzyme UvrB |
Matching Structure (courtesy of the PDB): |
|
