YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: GRF7_ARATH
Organism: Arabidopsis thaliana
Length: 365 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GRF7_ARATH.

Description E-value Query
Range
Subject
Range
GRF8_ORYSJ - Growth-regulating factor 8 OS=Oryza sativa subsp. japonica GN=GRF8 PE=2 SV=1
302.0 [0..59] [355..107]

Back

Predicted Domain #1
Region A:
Residues: [1-194]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFLKVSDKT TIPYRSDSLF SLNQQQYKES SFGFRDMEIH PHPTPYAGNG LLGCYYYYPF  60
   61 TNAQLKELER QAMIYKYMIA SIPVPFDLLV SSPSSASPCN NKNIAGDLEP GRCRRTDGKK 120
  121 WRCAKEVVSN HKYCEKHLHR GRPRSRKHVE PPYSRPNNNG GSVKNRDLKK LPQKLSSSSI 180
  181 KDKTLEPMEV SSSI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [195-365]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNYRDSRGSE KFTVLATTEQ ENKYLNFIDV WSDGVRSSEK QSTTSTPVSS SNGNLSLYSL  60
   61 DLSMGGNNLM GQDEMGLIQM GLGVIGSGSE DHHGYGPYGV TSSLEEMSSW LAPMSTTPGG 120
  121 PLAEILRPST NLAISGDIES YSLMETPTPS SSPSRVMKKM TSSVSDESSQ V

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle