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View Structure Prediction Details

Protein: CRSP_ARATH
Organism: Arabidopsis thaliana
Length: 769 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRSP_ARATH.

Description E-value Query
Range
Subject
Range
gi|21593457 - gi|21593457|gb|AAM65424.1| subtilisin-like serine protease [Arabidopsis thaliana]
523.0 [0..1] [769..1]

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Predicted Domain #1
Region A:
Residues: [1-118]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGITFFTPF LSFLYLLCIL FMTETEAGSR NGDGVYIVYM GSASSAANAN RAQILINTMF  60
   61 KRRANDLLHT YKHGFSGFAA RLTAEEAKVI AKKPGVVSVF PDPHFQLHTT HSWDFLKY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.69897
Match: 1r6vA
Description: Crystal structure of fervidolysin from Fervidobacterium pennivorans, a keratinolytic enzyme related to subtilisin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [119-769]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QTSVKVDSGP PSSASDGSYD SIVGILDTGI WPESESFNDK DMGPIPSRWK GTCMEAKDFK  60
   61 SSNCNRKIIG ARYYKNPDDD SEYYTTRDVI GHGSHVSSTI AGSAVENASY YGVASGTAKG 120
  121 GSQNARIAMY KVCNPGGCTG SSILAAFDDA IADGVDVLSL SLGAPAYARI DLNTDPIAIG 180
  181 AFHAVEQGIL VICSAGNDGP DGGTVTNTAP WIMTVAANTI DRDFESDVVL GGNKVIKGEG 240
  241 IHFSNVSKSP VYPLIHGKSA KSADASEGSA RACDSDSLDQ EKVKGKIVLC ENVGGSYYAS 300
  301 SARDEVKSKG GTGCVFVDDR TRAVASAYGS FPTTVIDSKE AAEIFSYLNS TKDPVATILP 360
  361 TATVEKFTPA PAVAYFSSRG PSSLTRSILK PDITAPGVSI LAAWTGNDSS ISLEGKPASQ 420
  421 YNVISGTSMA APHVSAVASL IKSQHPTWGP SAIRSAIMTT ATQTNNDKGL ITTETGATAT 480
  481 PYDSGAGELS STASMQPGLV YETTETDYLN FLCYYGYNVT TIKAMSKAFP ENFTCPADSN 540
  541 LDLISTINYP SIGISGFKGN GSKTVTRTVT NVGEDGEAVY TVSVETPPGF NIQVTPEKLQ 600
  601 FTKDGEKLTY QVIVSATASL KQDVFGALTW SNAKYKVRSP IVISSESSRT N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.69897
Match: 1xf1A
Description: Structure of C5a peptidase- a key virulence factor from Streptococcus
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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