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View Structure Prediction Details

Protein: gi|25408505, gi|...
Organism: Arabidopsis thaliana
Length: 379 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25408505, gi|....

Description E-value Query
Range
Subject
Range
gi|7549210 - gi|7549210|gb|AAF63787.1|AF142406_1 200 kDa antigen p200 [Babesia bigemina]
188.0 [0..2] [379..297]

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Predicted Domain #1
Region A:
Residues: [1-379]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIDEEEPMV FLDRTTRATR GKRMTKLLDD EVEEDEQFWN QEALKEEEHD DEYEAEREVA  60
   61 DEFDSDFNDD VFMSCLCIEY LFIKEPEPDA VAVNEKELRD LPKKRLIYPG KTASKKKKKK 120
  121 TKVVSQLEYI PGDEKPGEEL GNKEQEEKEE NEAQEDMEGE KVIRKSTRTS VVVRQAERDA 180
  181 LRAAIQATTK PIQRKKVGEE KRMTQEEMLL EAAQTEIMNL RNLERVLARE EEVKKKAIVH 240
  241 KAVYKGPQIR YHSKDGCNYL EFCNGASFNS ELSTKSVPYP EKAVCVITGL PAKYRDPKTG 300
  301 LPYATRDAFK AIRERFMDEH DGLRKKMEMG DLFDTLVAKG FATKQKRTKI PKSNKSFSLR 360
  361 SSARFLSSES EEESEEDSD

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Detection Method: PSI-BLAST
Confidence: 6.39794
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle