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View Structure Prediction Details

Protein: DTX48_ARATH
Organism: Arabidopsis thaliana
Length: 532 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DTX48_ARATH.

Description E-value Query
Range
Subject
Range
gi|113548993, gi... - gi|115453843|ref|NP_001050522.1| Os03g0571900 [Oryza sativa (japonica cultivar-group)], gi|113548993...
333.0 [0..49] [509..636]

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Predicted Domain #1
Region A:
Residues: [1-264]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCNSKPSSAS SSLLSCKDKT HISKLETCDT DNPHYSEFRD TDSLDLKRWP SFLEGLEEVK  60
   61 AIGKISGPTA MTGLLMYSRA MISMLFLGYL GELELAGGSL SIGFANITGY SVISGLSMGM 120
  121 EPICGQAYGA KQMKLLGLTL QRTVLLLLSC SVPISFSWLN MRRILLWCGQ DEEISSVAQQ 180
  181 FLLFAIPDLF LLSLLHPLRI YLRTQNITLP VTYSTAVSVL LHVPLNYLLV VKLEMGVAGV 240
  241 AIAMVLTNLN LVVLLSSFVY FTSV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 39.853872
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [265-532]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HSDTWVPITI DSLKGWSALL SLAIPTCVSV CLEWWWYEFM IILCGLLANP RATVASMGIL  60
   61 IQTTALVYVF PSSLSLGVST RISNELGAKR PAKARVSMII SLFCAIALGL MAMVFAVLVR 120
  121 HHWGRLFTTD AEILQLTSIA LPIVGLCELG NCPQTTGCGV LRGCARPTLG ANINLGSFYF 180
  181 VGMPVAILFG FVFKQGFPGL WFGLLAAQAT CASLMLCALL RTDWKVQAER AEELTSQTPG 240
  241 KSPPLLPIAS SKSRSTSGTE DMMRTMLV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 41.638272
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle