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View Structure Prediction Details

Protein: OBE2_ARATH
Organism: Arabidopsis thaliana
Length: 574 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OBE2_ARATH.

Description E-value Query
Range
Subject
Range
gi|110742793 - gi|110742793|dbj|BAE99299.1| hypothetical protein [Arabidopsis thaliana]
566.0 [0..1] [574..1]
PVIP_NICBE - OBERON-like protein OS=Nicotiana benthamiana GN=PVIP PE=1 SV=1
457.0 [0..13] [526..1]
gi|113649388, gi... - gi|77556323|gb|ABA99119.1| Potyvirus VPg interacting protein, putative, expressed [Oryza sativa (jap...
452.0 [0..1] [555..1]
gi|92873982 - gi|92873982|gb|ABE82312.1| Zinc finger, PHD-type; Arabidopsis thaliana 130.7kDa hypothetical protein...
442.0 [0..11] [558..694]
PVIP_PEA - OBERON-like protein (Fragment) OS=Pisum sativum GN=PVIP PE=1 SV=1
423.0 [0..55] [526..1]

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Predicted Domain #1
Region A:
Residues: [1-207]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTSSGSNHP HQMLPPRQQQ RSGGGLETAL SLVSSDQEPR RESPAESASS QETWPLGDTV  60
   61 AGKKSMSQKT EPDSMEQTVN VMHHVSNADK VSVRDIARER VELVAERMHR LPDEFLDELK 120
  121 NGLKSILEGN VAQSVDEFMF LQKVVQSRTD LSSVTLVRAH RVQLEILVAI NTGIQAFLHP 180
  181 NISLSQPSLI EIFVYKRCRN IACQNQL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.992
Match: 2o0hA
Description: No description for 2o0hA was found.

Predicted Domain #2
Region A:
Residues: [208-279]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PADDCYCDIC TNRKGFCNLC MCTICNKFDF SVNTCRWIGC DLCSHWTHTD CAIRDGQITT  60
   61 GSSAKNNTSG PG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [280-574]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EIVFKCRACN RTSELLGWVK DVFQHCAPNW DRESLMKELD FVSRIFRGSE DQRGRKLFWK  60
   61 CEELIDKIKG GLAEATAAKL ILMFFQEIES DSAKSFENGE GGRLMAPQDA CNRIAEVVQE 120
  121 TLRKMEIVAE EKMRMFKKAR MALETCDREL EDKAKEVSEL KAERQKKKLQ IDELERIVRL 180
  181 KQAEADMFQL KANEAKREAD RLQRIVLAKM DKSEEEYASN YLKQRLSEAE AEKQYLFEKI 240
  241 KLQENSRVAS QSSGGGGDPS QVMMYSKIRD LLQGYNLSPK VDPQLNERNP FRSNP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.69897
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle