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View Structure Prediction Details

Protein: KCS18_ARATH
Organism: Arabidopsis thaliana
Length: 506 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KCS18_ARATH.

Description E-value Query
Range
Subject
Range
gi|30424122 - gi|30424122|emb|CAD90160.1| beta-ketoacyl-CoA synthase FAE1.2 [Brassica juncea]
469.0 [0..1] [506..1]

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Predicted Domain #1
Region A:
Residues: [1-506]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSVNVKLLY RYVLTNFFNL CLFPLTAFLA GKASRLTIND LHNFLSYLQH NLITVTLLFA  60
   61 FTVFGLVLYI VTRPNPVYLV DYSCYLPPPH LKVSVSKVMD IFYQIRKADT SSRNVACDDP 120
  121 SSLDFLRKIQ ERSGLGDETY SPEGLIHVPP RKTFAASREE TEKVIIGALE NLFENTKVNP 180
  181 REIGILVVNS SMFNPTPSLS AMVVNTFKLR SNIKSFNLGG MGCSAGVIAI DLAKDLLHVH 240
  241 KNTYALVVST ENITQGIYAG ENRSMMVSNC LFRVGGAAIL LSNKSGDRRR SKYKLVHTVR 300
  301 THTGADDKSF RCVQQEDDES GKIGVCLSKD ITNVAGTTLT KNIATLGPLI LPLSEKFLFF 360
  361 ATFVAKKLLK DKIKHYYVPD FKLAVDHFCI HAGGRAVIDE LEKNLGLSPI DVEASRSTLH 420
  421 RFGNTSSSSI WYELAYIEAK GRMKKGNKAW QIALGSGFKC NSAVWVALRN VKASANSPWQ 480
  481 HCIDRYPVKI DSDLSKSKTH VQNGRS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 87.522879
Match: 1bi5A
Description: Chalcone synthase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.61499311836466 bayes_pls_golite062009
transferase activity 1.02674433736465 bayes_pls_golite062009
transferase activity, transferring acyl groups 0.95018443969363 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 0.71137845857094 bayes_pls_golite062009
acyltransferase activity 0.57223728364314 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle