| Protein: | gi|25406454, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 327 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25406454, gi|....
| Description | E-value | Query Range |
Subject Range |
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307.0 | [0..60] | [326..2] |
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307.0 | [0..60] | [326..2] |
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306.0 | [0..60] | [326..2] |
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305.0 | [0..60] | [326..2] |
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304.0 | [0..52] | [326..16] |
|
Region A: Residues: [1-75] |
1 11 21 31 41 51
| | | | | |
1 MALFQEKLSS LSSSYSSIHS LPRILVSKPR NRIAVTKSRS ICRASWQELA GVLVFSAIPF 60
61 TAVKAIANSS IGVSL
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.723 | a.29.16 | Description not found. |
| View | Download | 0.689 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.674 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.659 | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.659 | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.624 | a.7.14 | Description not found. |
| View | Download | 0.597 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.594 | a.59.1 | PAH2 domain |
| View | Download | 0.525 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.509 | a.7.7 | BAG domain |
| View | Download | 0.482 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.471 | a.7.8 | GAT domain |
| View | Download | 0.456 | d.52.8 | Description not found. |
| View | Download | 0.425 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.330 | d.52.8 | Description not found. |
|
Region A: Residues: [76-327] |
1 11 21 31 41 51
| | | | | |
1 RRRLEEKKKE AVENSSRFKS KAQEARNDSK WYGKERPRWF GPIPYDYPPY LTGELPGDYG 60
61 FDIAGLGKDR LTFDKYFNFE ILHARWAMLA ALGALIPEVF DLTGTFHFAE PVWWRVGYSK 120
121 LQGETLEYLG IPGLHVAGSQ GVIVIAICQV LLMVGPEYAR YCGIEALEPL GIYLPGDINY 180
181 PGGTLFDPLN LSEDPVAFED LKVKEIKNGR LAMVAWLGFY AQAAFTGKGP VQNLVDHVSD 240
241 PLHNNLIAML QT
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| Detection Method: | |
| Confidence: | 77.39794 |
| Match: | 1rwtA |
| Description: | Crystal Structure of Spinach Major Light-harvesting complex at 2.72 Angstrom Resolution |
Matching Structure (courtesy of the PDB): |
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