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View Structure Prediction Details

Protein: STAD1_ARATH
Organism: Arabidopsis thaliana
Length: 394 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for STAD1_ARATH.

Description E-value Query
Range
Subject
Range
gi|951427 - gi|951427|gb|AAA74692.1| stearoyl-acyl-carrier protein desaturase
632.0 [0..1] [393..17]

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Predicted Domain #1
Region A:
Residues: [1-394]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVMAMDRIAL FSSSSSVYHH GSSHSHGSKS SRVFTIRSDS TAVGRKLYIP PREVHLQVKY  60
   61 SMPPQKLEIF KSLEGWANDN LLAYLKPVEK SWQPTDFLPE PESEGFYDQV KELRERCKEL 120
  121 SDDYLIVLVG DMITEEALPT YQTMINTLDG VRDETGASPT PWAVWTRAWT AEENRHGDLL 180
  181 NKYLYLSGRV DMRQIEKTIQ YLIGSGMDPK TENNPYLGFI YTSFQERATF ISHGNTARLA 240
  241 KDLGDLTLGK ICGTIAADER RHEHAYTKIV EKLFEIDPDT TVVGFADMMR KKISMPAHLM 300
  301 YDGRDDNLFD HFSSVAQRLG VYTAKDYADI LQHLVERWNV EKLSDLSSEG NRAQDYLCGL 360
  361 PARIRKLEER AQGRTKEAAK NIPFSWIFGR EVRA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 171.0
Match: 1oq4A
Description: delta 9-stearoyl-acyl carrier protein desaturase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle