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View Structure Prediction Details

Protein: gi|15240021, gi|...
Organism: Arabidopsis thaliana
Length: 890 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|15240021, gi|....

Predicted Domain #1
Region A:
Residues: [1-593]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRSKAPAKK QQKKGIDFKK IKRKLGRKLP PPKNATNTEI KSKAIILPEQ SVAAEKSGLA  60
   61 TSKKGLTLKE LLPQTSHHNA KVRKDALYGI KDLFKNHPEE LQSHKYAIIQ KLRERISDDD 120
  121 KLVRDVFYQL FDIDIFPLCK EDNQGLMVSL LMPYIFSAMA HSAIDVRLMA FKFFHLVVEF 180
  181 YPPTFSLDAE KILENYKDII QKNHFYVEDK SKLKVALSGL SHCLSVLPCD ESDTKSQKKG 240
  241 PSQNETLLTY EQDATKDCVL YSILTKFLRI LTGYAHVYQR LKEVVAVLIN CFQDFIPLIH 300
  301 APRGFDAHSF DCIQHILRSI GYAIKFSIRR HKQRQTAWRP ASEEVTLMIL DQDIASMLLK 360
  361 KLLGSFPLDP ENNLYGKGDD KYFKLNSVLT EIFLEVSEWS HLPTDLSNRY LEFIENTLLG 420
  421 KITRSIRLRK DIHEKTLLAL LPFLPKLILR VDRDWRDNLL EAFTITFSDC KPESKLKLAC 480
  481 ISTVRDMIIP NGDILYPNAS DPTVHYYQVA WVNKLPSLLN QLGNEHPVST QVVLQLLLDL 540
  541 GRVGCLNASP TCEDDIRNFF SLCQGEGDVP GGPFASLPRE AQELALCFLY YFT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 78.69897
Match: 2qmrA
Description: No description for 2qmrA was found.

Predicted Domain #2
Region A:
Residues: [594-662]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TDKFSSPMMK AIVSCCLYPQ LEPAVLYRIV EILHTAYRAG YIQITDHFSF LITLIARFKV  60
   61 VPEKLQSSI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [663-890]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ECNERETYCG TFKEVTKLVC SCLSEMGDSS LVLQIVEKVL LEQIVLKPAL DNGCAILRMI  60
   61 CVLDSTPTTL SERSVTTLSE FLPGYMINIV NCIPEDKENS YLYIQTCLYY LVPCYFLFNR 120
  121 SSKLTEQVLI RMRSMISENT KALESVQDRE SGRNSLNMIQ CIISVILLMH NDVKVRKIIS 180
  181 SFKPEIDLIL QNVITLQSSR STSLTVEGKH MMKIAGERLR IASKSLLA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle