| Protein: | TPP2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 367 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TPP2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
470.0 | [0..1] | [367..1] |
|
Region A: Residues: [1-175] |
1 11 21 31 41 51
| | | | | |
1 MAIRVTFTYS SYVARSIASS AGTRVGTGDV RSCFETWVRP RFCGHNQIPD IVDKSPGSNT 60
61 WGPSSGPRAR PASSMYSTIA REILEEGCKS PLVLGMISLM NLTGAPQFSG MTGLGISPFK 120
121 TSSVIPFLRG SKWMPCSIPA TLSTDIAEVD RGGKVCDPKV KLELSDKVSN GGNGW
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [176-290] |
1 11 21 31 41 51
| | | | | |
1 VNKLLNICSE DAKAAFTAVT VSLLFRSALA EPKSIPSTSM LPTLDVGDRV IAEKVSYFFR 60
61 KPEVSDIVIF KAPPILVEHG YSCADVFIKR IVASEGDWVE VCDGKLLVND TVQAE
|
| Detection Method: | |
| Confidence: | 3.09 |
| Match: | 1t7dA |
| Description: | Crystal structure of Escherichia coli type I signal peptidase in complex with a lipopeptide inhibitor |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [291-367] |
1 11 21 31 41 51
| | | | | |
1 DFVLEPIDYE MEPMFVPEGY VFVLGDNRNK SFDSHNWGPL PIKNIIGRSV FRYWPPSKVS 60
61 DIIHHEQVSQ KRAVDVS
|
| Detection Method: | |
| Confidence: | 21.154902 |
| Match: | 1kn9A |
| Description: | Type 1 signal peptidase |
Matching Structure (courtesy of the PDB): |
|
