| Protein: | PME39_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 532 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PME39_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
535.0 | [0..19] | [532..54] |
|
Region A: Residues: [1-181] |
1 11 21 31 41 51
| | | | | |
1 MINNHPIREK PKHIIFNLLS LIFFLIFLST VVSSQSPSYT THKTQRLTET KTIPELIIAD 60
61 LNLTILKVNL ASSNFSDLQT RLFPNLTHYE RCAFEDCLGL LDDTISDLET AVSDLRSSSL 120
121 EFNDISMLLT NVMTYQDTCL DGFSTSDNEN NNDMTYELPE NLKEIILDIS NNLSNSLHML 180
181 Q
|
| Detection Method: |  |
| Confidence: | 19.39794 |
| Match: | 1x90A |
| Description: | Crystal structure of mutant form B of a pectin methylesterase inhibitor from Arabidopsis |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [182-532] |
1 11 21 31 41 51
| | | | | |
1 VISRKKPSPK SSEVDVEYPS WLSENDQRLL EAPVQETNYN LSVAIDGTGN FTTINDAVFA 60
61 APNMSETRFI IYIKGGEYFE NVELPKKKTM IMFIGDGIGK TVIKANRSRI DGWSTFQTPT 120
121 VGVKGKGYIA KDISFVNSAG PAKAQAVAFR SGSDHSAFYR CEFDGYQDTL YVHSAKQFYR 180
181 ECDIYGTIDF IFGNAAVVFQ NSSLYARKPN PGHKIAFTAQ SRNQSDQPTG ISILNCRILA 240
241 APDLIPVKEN FKAYLGRPWR KYSRTVIIKS FIDDLIHPAG WLEGKKDFAL ETLYYGEYMN 300
301 EGPGANMAKR VTWPGFRRIE NQTEATQFTV GPFIDGSTWL NSTGIPFSLG F
|
| Detection Method: | |
| Confidence: | 105.0 |
| Match: | 1gq8A |
| Description: | Pectin methylesterase PemA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.142826098671881 | bayes_pls_golite062009 |
