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View Structure Prediction Details

Protein: IMB1_ARATH
Organism: Arabidopsis thaliana
Length: 870 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for IMB1_ARATH.

Predicted Domain #1
Region A:
Residues: [1-870]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMEVTQLLI NAQSIDGTVR KHAEESLKQF QEQNLAGFLL SLAGELANDE KPVDSRKLAG  60
   61 LVLKNALDAK EQHRKYELVQ RWLALDMSTK SQIRAFLLKT LSAPVPDVRS TASQVIAKVA 120
  121 GIELPQKQWP ELIVSLLSNI HQLPAHVKQA TLETLGYLCE EVSPDVVEQE HVNKILTAVV 180
  181 QGMNAAEGNT DVRLAATRAL YMALGFAQAN FNNDMERDYI MRVVCEATLS PEVKIRQAAF 240
  241 ECLVSIASTY YEKLAHYMQD IFNITAKAVR EDDESVALQA IEFWSSICDE EIDILEEYGG 300
  301 EFAGDSDVPC FYFTKQALPG LVPLLLETLL KQEEDQDLDE GAWNIAMAGG TCLGLVARAV 360
  361 GDDIVPHVMP FIEEKISKPD WREREAATYA FGSILEGPSA DKLMAIVNAA LTFMLNALTN 420
  421 DPSNHVKDTT AWTLGRIFEF LHGSTIETPI INQANCQQII TVLIQSMNDA PNVAEKACGA 480
  481 LYFLAQGYED IGPSSPLTPF FQEIIKSLLA VAHREDATES RLRTAAYEAL NEVVRCSTDE 540
  541 TSTMVLQLVP VIMMELHNTL EGEKLSLDER EKQNELQGLL CGCLQVIIQK LGSEPTKSKF 600
  601 MEYADQMMGL FLRVFGCRSA TAHEEAMLAI GALAYAAGPN FAKYMPEFYK YLEMGLQNFE 660
  661 EYQVCAVTVG VVGDVCRALE DKILPYCDGI MTQLLKDLSS NQLHRSVKPP IFSCFGDIAL 720
  721 AIGEDFDKYW RYSMPMLQSA AELSAHSAGA DDEMTEYTNS LRNGILEAYS GIFQGFKNSA 780
  781 KTQLLIPFAP HILQFLDSIY MEKDMDEVVM KTAIGVLGDL ADTLGSHVGG LIQQSVSSKE 840
  841 FLNECLSSED HTIKEAAEWA KHAITRAISV 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 119.0
Match: 1uklA
Description: Crystal structure of Importin-beta and SREBP-2 complex
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle