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View Structure Prediction Details

Protein: PHSB_ARATH
Organism: Arabidopsis thaliana
Length: 495 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PHSB_ARATH.

Description E-value Query
Range
Subject
Range
gi|238482071, gi... - gi|238482071|ref|XP_002372274.1| amino acid permease (Gap1), putative [Aspergillus flavus NRRL3357],...
gi|169765514 - gi|169765514|ref|XP_001817228.1| hypothetical protein [Aspergillus oryzae RIB40]
gi|83765083 - gi|83765083|dbj|BAE55226.1| unnamed protein product [Aspergillus oryzae]
281.0 [0..3] [490..37]

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Predicted Domain #1
Region A:
Residues: [1-495]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKRRIITVN PSASIEMSQY ENNEVPYSSV GADEVPSSPP KATDKIRKVS MLPLVFLIFY  60
   61 EVSGGPFGVE DSVNAAGPLL ALLGFVIFPF IWSIPEALIT AEMGTMYPEN GGYVVWVSSA 120
  121 LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN 180
  181 YRGLTIVGWV AVLMGVFSIL PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN 240
  241 YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV 300
  301 AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL 360
  361 GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV RMRMKHPAAS RPYKIPIGTT 420
  421 GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP 480
  481 DLQQQTREYE ETLIR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.37
Match: 2a65A
Description: Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle