| Protein: | TMN3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 592 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TMN3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
759.0 | [0..18] | [592..164] |
|
|
751.0 | [0..20] | [592..27] |
|
|
748.0 | [0..20] | [592..34] |
|
|
746.0 | [0..18] | [592..32] |
|
|
744.0 | [0..18] | [592..33] |
|
|
744.0 | [0..18] | [592..33] |
|
|
743.0 | [0..18] | [592..33] |
|
|
741.0 | [0..18] | [592..33] |
|
Region A: Residues: [1-68] |
1 11 21 31 41 51
| | | | | |
1 MRLPTTLLLF IGALIFSGAG TVRSDASDHR YKDGDSVPLY ANKVGPFHNP SETYRYFDLP 60
61 FCIPEGVK
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.708 | N/A | N/A | g.41.3 | Zinc beta-ribbon |
| View | Download | 0.644 | N/A | N/A | g.41.8 | Zn-binding ribosomal proteins |
| View | Download | 0.591 | N/A | N/A | g.41.3 | Zinc beta-ribbon |
| View | Download | 0.571 | N/A | N/A | g.41.3 | Zinc beta-ribbon |
| View | Download | 0.558 | N/A | N/A | b.34.13 | Chromo domain-like |
| View | Download | 0.461 | N/A | N/A | g.8.1 | BPTI-like |
| View | Download | 0.332 | N/A | N/A | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.273 | N/A | N/A | g.8.1 | BPTI-like |
|
Region A: Residues: [69-146] |
1 11 21 31 41 51
| | | | | |
1 DKKEALGEVL NGDRLVSAPY KLNFRDEKDS EVYCKKKLSR EEVEHFRRAV EKDYYFQMYY 60
61 DDLPIWGFIG KVDKESKS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.704 | d.58.52 | Description not found. |
| View | Download | 0.642 | d.95.2 | Homing endonucleases |
| View | Download | 0.642 | d.95.2 | Homing endonucleases |
| View | Download | 0.633 | d.95.1 | Glucose permease domain IIB |
| View | Download | 0.630 | d.95.2 | Homing endonucleases |
| View | Download | 0.630 | d.95.2 | Homing endonucleases |
| View | Download | 0.597 | d.95.2 | Homing endonucleases |
| View | Download | 0.597 | d.95.2 | Homing endonucleases |
| View | Download | 0.597 | d.95.1 | Glucose permease domain IIB |
| View | Download | 0.588 | d.74.1 | Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |
| View | Download | 0.342 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.273 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.253 | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.252 | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.235 | g.41.17 | Description not found. |
|
Region A: Residues: [147-321] |
1 11 21 31 41 51
| | | | | |
1 DPSEFKYFLY KHIQFEILYN KDRVIEINAR MDPHSLVDLT EDKEVDAEFM YTVKWKETET 60
61 SFEKRMDKYA MSSSLPHHLE IHWFSIINSC VTVLLLTGFL ATILMRVLKN DFMKYAQDEE 120
121 AADDQEETGW KYIHGDVFRF PKNKSLFAAS LGSGTQLFTL TIFIFMLSLV GVFYP
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [322-461] |
1 11 21 31 41 51
| | | | | |
1 YNRGALFTAL VVIYALTSGI AGYTASSFYC QLEGKNWVRN LLLTGGLFCG PLFLTFCFLN 60
61 TVAIAYSATA ALPFGTIIVI VLIWTLVTSP LLVLGGIAGK NSKAEFQAPV RTTKYPREIP 120
121 PLPWYRSAVP QMAMAGFLPF
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [462-592] |
1 11 21 31 41 51
| | | | | |
1 SAIYIELYYI FASVWGHRIY TIYSILFIVF IILLIVTAFI TVALTYFQLA AEDHEWWWRS 60
61 FLCGGSTGLF IYAYCLYYYY ARSDMSGFMQ TSFFFGYMAC ICYGFFLMLG TVGFRAALLF 120
121 VRHIYRSIKC E
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
