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View Structure Prediction Details

Protein: P2C78_ARATH
Organism: Arabidopsis thaliana
Length: 413 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for P2C78_ARATH.

Description E-value Query
Range
Subject
Range
gi|10432446, gi|... - gi|22553023|emb|CAC84141.2| protein phosphatase 2C [Nicotiana tabacum], gi|10432446|emb|CAC10358.1| ...
275.0 [0..1] [412..1]

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Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEICYENET MMIETTATVV KKATTTTRRR ERSSSQAARR RRMEIRRFKF VSGEQEPVFV  60
   61 DGDLQRRRRR ESTVAASTST VFYETAKEVV V

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [92-413]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LCESLSSTVV ALPDPEAYPK YGVASVCGRR REMEDAVAVH PFFSRHQTEY SSTGFHYCGV  60
   61 YDGHGCSHVA MKCRERLHEL VREEFEADAD WEKSMARSFT RMDMEVVALN ADGAAKCRCE 120
  121 LQRPDCDAVG STAVVSVLTP EKIIVANCGD SRAVLCRNGK AIALSSDHKP DRPDELDRIQ 180
  181 AAGGRVIYWD GPRVLGVLAM SRAIGDNYLK PYVISRPEVT VTDRANGDDF LILASDGLWD 240
  241 VVSNETACSV VRMCLRGKVN GQVSSSPERE MTGVGAGNVV VGGGDLPDKA CEEASLLLTR 300
  301 LALARQSSDN VSVVVVDLRR DT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.69897
Match: 2p8eA
Description: No description for 2p8eA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle