| Protein: | gi|15231796, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 228 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15231796, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
180.0 | [0..1] | [182..1] |
|
Region A: Residues: [1-127] |
1 11 21 31 41 51
| | | | | |
1 MAESQTGGGG GGSHESGGDQ SPRSLNVREQ DRFLPIANIS RIMKRGLPLN GKIAKDAKET 60
61 MQECVSEFIS FVTSEASDKC QREKRKTING DDLLWAMATL GFEDYIDPLK VYLMRYREME 120
121 GDTKGSG
|
| Detection Method: |  |
| Confidence: | 33.09691 |
| Match: | 1n1jA |
| Description: | Nuclear transcription factor Y subunit beta (Nf-Yb3) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.581886805340955 | bayes_pls_golite062009 |
|
Region A: Residues: [128-228] |
1 11 21 31 41 51
| | | | | |
1 KGGESSAKRD GQPSQVSQFS QVPQQGSFSQ GPYGNSQSLR FGNSIEHLEV LMSSTRTLFI 60
61 TIFRDSTMPV VSENLSDPLS IDMDCEAIYH HFIGLLILSC K
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.434 | N/A | N/A | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.419 | N/A | N/A | d.233.1 | Inhibitor of vertebrate lysozyme, Ivy |
| View | Download | 0.255 | N/A | N/A | d.82.2 | Frataxin-like |
| View | Download | 0.238 | N/A | N/A | d.58.19 | Bacterial exopeptidase dimerisation domain |
| View | Download | 0.208 | N/A | N/A | d.93.1 | SH2 domain |
