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View Structure Prediction Details

Protein: GSXL6_ARATH
Organism: Arabidopsis thaliana
Length: 470 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GSXL6_ARATH.

Description E-value Query
Range
Subject
Range
gi|23502768, gi|... - gi|23502768|ref|NP_698895.1| dihydrolipoamide dehydrogenase [Brucella suis 1330], gi|23348787|gb|AAN...
gi|254708909 - gi|254708909|ref|ZP_05170720.1| dihydrolipoamide dehydrogenase [Brucella pinnipedialis B2/94]
gi|254707554 - gi|254707554|ref|ZP_05169382.1| dihydrolipoamide dehydrogenase [Brucella pinnipedialis M163/99/10]
gi|254700562 - gi|254700562|ref|ZP_05162390.1| dihydrolipoamide dehydrogenase [Brucella suis bv. 5 str. 513]
gi|225616943, gi... - gi|225628118|ref|ZP_03786153.1| dihydrolipoamide dehydrogenase [Brucella ceti str. Cudo], gi|2256169...
gi|254715982 - gi|254715982|ref|ZP_05177793.1| dihydrolipoamide dehydrogenase [Brucella ceti M13/05/1]
gi|254713664 - gi|254713664|ref|ZP_05175475.1| dihydrolipoamide dehydrogenase [Brucella ceti M644/93/1]
261.0 [0..11] [422..3]

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Predicted Domain #1
Region A:
Residues: [1-404]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPPPNSISS RNVAVIGAGA AGLVAARELR REGHTVTIFE RQKQVGGLWV CTPNVEPDLL  60
   61 SIDPDRTVVH SSVYQSLRTN LPRECMGYSD FPFVTRPDDE SRDPRRYPDH REVMRYLQDF 120
  121 AKEFKIEEMI RFETEVFRVE PTAENSCKWR VQFRSSSGVS GEDIFDAVVI CNGHFTEPRL 180
  181 AHIPGIESWP GKQIHSHNYR VSDPFKGQVV IVIGYQSSGS DISRDIAILA KEVHIAAKSD 240
  241 AYAKESSIYS NLHFHPTIDR VYEDGSVVFQ DGKLIFADAI VHCTGYKYCF PFLETKGYVN 300
  301 VEDNRVGPLY KHVFPPALAP GLSFIGLPSM ALQFFMFEIQ SRWVASVLSG RVKLPSEEQM 360
  361 MEDVIAFYAK LKSLGIPKRF THFLTDPQWT PMFEKLKPHE AVLI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.39794
Match: 2gv8A
Description: No description for 2gv8A was found.

Predicted functions:

Term Confidence Notes
oxidoreductase activity, acting on sulfur group of donors 2.21718178937539 bayes_pls_golite062009
catalytic activity 1.56773888754354 bayes_pls_golite062009
oxidoreductase activity 0.44090433301056 bayes_pls_golite062009
binding 0.400596507621048 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor 0.31095562417378 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [405-470]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SQSEYFNWIA EQCGCSSIER WREEQYNIAI KKDDDNFRDE WDDDDQIIQE AYRDFAKFKP  60
   61 SKVWST

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.30103
Match: 1q1rA
Description: Crystal Structure of Putidaredoxin Reductase from Pseudomonas putida
Matching Structure (courtesy of the PDB):

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