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View Structure Prediction Details

Protein: KCS12_ARATH
Organism: Arabidopsis thaliana
Length: 476 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KCS12_ARATH.

Description E-value Query
Range
Subject
Range
KCS11_ARATH - 3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana GN=KCS11 PE=1 SV=1
386.0 [0..2] [453..70]

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Predicted Domain #1
Region A:
Residues: [1-476]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLLFLFFSL LLSYLFFKIW KLIDSKQDKD CYILDYQCHK PTDDRMVSTQ FSGEIIYRNQ  60
   61 NLGLTEYKFL LKAIVSSGIG EQTYAPRLVF EGREERPSLQ DGISEMEEFY VDSIGKLLER 120
  121 NQISPKDIDI LVVNVSMLSS TPSLASRIIN HYKMRDDVKV FNLTGMGCSA SLISVDIVKN 180
  181 IFKSYANKLA LVATSESLSP NWYSGNNRSM ILANCLFRSG GCAILLTNKR SLRKKAMFKL 240
  241 KCMVRTHHGA REESYNCCIQ AEDEQGRVGF YLGKNLPKAA TRAFVENLKV ITPKILPVTE 300
  301 LIRFMLKLLI KKIKIRQNPS KGSTNLPPGT PLKAGINFKT GIEHFCIHTG GKAVIDGIGH 360
  361 SLDLNEYDIE PARMTLHRFG NTSASSLWYV LAYMEAKKRL KRGDRVFMIS FGAGFKCNSC 420
  421 VWEVVRDLTG GESKGNVWNH CIDDYPPKSI LNPYLEKFGW IQDEDPDTFK VPDAFM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 79.0
Match: 1bq6A
Description: Chalcone synthase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.61499311836466 bayes_pls_golite062009
transferase activity 1.02674433736465 bayes_pls_golite062009
transferase activity, transferring acyl groups 0.95018443969363 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 0.71137845857094 bayes_pls_golite062009
acyltransferase activity 0.57223728364314 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle