| Protein: | gi|9757802, gi|1... |
| Organism: | Arabidopsis thaliana |
| Length: | 812 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9757802, gi|1....
| Description | E-value | Query Range |
Subject Range |
|
|
402.0 | [0..1] | [811..290] |
|
Region A: Residues: [1-63] |
1 11 21 31 41 51
| | | | | |
1 MEQLKVLPLL FLSWVMFLQS THQLPNSQTQ VLYQLRKHLE FPKALESWGN YYGDLCQIPA 60
61 TAH
|
| Detection Method: |  |
| Confidence: | 11.30103 |
| Match: | 2omyA |
| Description: | No description for 2omyA was found. |
|
Region A: Residues: [64-430] |
1 11 21 31 41 51
| | | | | |
1 MSITCQGNSI TELKVMGDKL FKPFGMFDGS SLPNHTLSEA FIIDSFVTTL TRLTSLRVLS 60
61 LVSLGIYGEF PGKIHRLNSL EYLDLSSNFL FGSVPPDISR LVMLQSLMLD GNYFNGSVPD 120
121 TLDSLTNLTV LSLKNNRFKG PFPSSICRIG RLTNLALSHN EISGKLPDLS KLSHLHMLDL 180
181 RENHLDSELP VMPIRLVTVL LSKNSFSGEI PRRFGGLSQL QHLDLSFNHL TGTPSRFLFS 240
241 LPNISYLDLA SNKLSGKLPL NLTCGGKLGF VDLSNNRLIG TPPRCLAGAS GERVVKLGGN 300
301 CLSIIGSHDQ HQEFLCEEAE TEGKQFQGRK VGILIAVIGG AVLVLVFFVL VILLLLCTNR 360
361 CSSCCSR
|
| Detection Method: | |
| Confidence: | 5.045757 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [431-812] |
1 11 21 31 41 51
| | | | | |
1 EKSVPQTRLK VVTDNSHTSL SSEVLASARL ISQTAKLGAQ GVPSCRSFSF EDLKEATDDF 60
61 DSSRFLGEGS LGKLYRGTLE NGSSIAIRCL VLSRKFSSQS IRGHLDWMAK LNHPHLLGFL 120
121 GHCTQTSGEH DPVATILYLV YEYMPNGSYR THLSESFSEK ILTWPDRLAI LIEIAKAVHF 180
181 LHTGVMPGSF NNQLKTNNIL LDEHKIAKLS DYGVSAIIEE NEKLEDSTLL LLLHFADKVR 240
241 NPQVKVCIFC PCIAKLHGIY ENLIQTLRLC RKKAKREDDV YNFGFILLES LIGPVPTTKG 300
301 EAFLLNEMTS FGSQDGRQKI VSPTVLTTSS QESLSIAISI ANKCVLLEPS ARPSFEDVLW 360
361 NLQYAAQMQS AADAERKSDT SS
|
| Detection Method: | |
| Confidence: | 65.0 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
