| Protein: | SR45_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 414 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SR45_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
193.0 | [0..1] | [180..13] |
|
Region A: Residues: [1-182] |
1 11 21 31 41 51
| | | | | |
1 MAKPSRGRRS PSVSGSSSRS SSRSRSGSSP SRSISRSRSR SRSLSSSSSP SRSVSSGSRS 60
61 PPRRGKSPAG PARRGRSPPP PPSKGASSPS KKAVQESLVL HVDSLSRNVN EAHLKEIFGN 120
121 FGEVIHVEIA MDRAVNLPRG HGYVEFKARA DAEKAQLYMD GAQIDGKVVK ATFTLPPRQK 180
181 VS
|
| Detection Method: |  |
| Confidence: | 45.522879 |
| Match: | 1po6A |
| Description: | Crystal Structure of UP1 Complexed With d(TAGG(6MI)TTAGGG): A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6MI) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [183-318] |
1 11 21 31 41 51
| | | | | |
1 SPPKPVSAAP KRDAPKSDNA AADAEKDGGP RRPRETSPQR KTGLSPRRRS PLPRRGLSPR 60
61 RRSPDSPHRR RPGSPIRRRG DTPPRRRPAS PSRGRSPSSP PPRRYRSPPR GSPRRIRGSP 120
121 VRRRSPLPLR RRSPPP
|
| Detection Method: | |
| Confidence: | 0.987 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
|
Region A: Residues: [319-414] |
1 11 21 31 41 51
| | | | | |
1 RRLRSPPRRS PIRRRSRSPI RRPGRSRSSS ISPRKGRGPA GRRGRSSSYS SSPSPRRIPR 60
61 KISRSRSPKR PLRGKRSSSN SSSSSSPPPP PPPRKT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
