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View Structure Prediction Details

Protein: gi|21360399, gi|...
Organism: Arabidopsis thaliana
Length: 404 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21360399, gi|....

Description E-value Query
Range
Subject
Range
B3GT3_ARATH - Probable beta-1,3-galactosyltransferase 3 OS=Arabidopsis thaliana GN=B3GALT3 PE=2 SV=1
351.0 [0..1] [404..1]

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Predicted Domain #1
Region A:
Residues: [1-124]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAKIKGEYS SRSFVSRKWT ILLCLGSFCV GMFFTNRMWN IPESKGMSHP SVTEAERLKL  60
   61 VSEGCNPKAK EVKRDPQALF GEVANTHIAL QTLDKTISSL EMELAAARSV QESLQNGAPL 120
  121 SDDM

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [125-404]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKKQPQEQRR FLMVVGINTA FSSRKRRDSI RATWMPQGEK RKRLEEEKGI IIRFVIGHSA  60
   61 TTGGILDRAI EAEDRKHGDF LRLDHVEGYL ELSGKTKTYF STAFSMWDAD FYVKVDDDVH 120
  121 VNIATLGETL VRHRKKPRVY IGCMKSGPVL SQKGVRYHEP EYWKFGENGN KYFRHATGQL 180
  181 YAISRDLASY ISINQHVLHK YANEDVSLGA WFIGIDVKHI DDRRLCCGTP PDCEWKAQAG 240
  241 NICVASFDWS CSGICRSADR IKEVHRRCGE GEKALWSATF 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.69897
Match: 2j0aA
Description: No description for 2j0aA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle