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View Structure Prediction Details

Protein: ACBP1_ARATH
Organism: Arabidopsis thaliana
Length: 338 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACBP1_ARATH.

Description E-value Query
Range
Subject
Range
gi|115774573, gi... - gi|115963452|ref|XP_001196111.1| PREDICTED: similar to ankyrin 2,3/unc44 [Strongylocentrotus purpura...
431.0 [0..3] [338..169]

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Predicted Domain #1
Region A:
Residues: [1-338]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADWYQLAQS IIFGLIFAYL LAKLISILLA FKDENLSLTR NHTTQSEYEN LRKVETLTGI  60
   61 SGETDSLIAE QGSLRGDEDE SDDDDWEGVE STELDEAFSA ATAFVAAAAS DRLSQKVSNE 120
  121 LQLQLYGLYK IATEGPCTAP QPSALKMTAR AKWQAWQKLG AMPPEEAMEK YIDLVTQLYP 180
  181 AWVEGGSKRR NRSGEAAGPM GPVFSSLVYE EESDNELKID AIHAFAREGE VENLLKCIEN 240
  241 GIPVNARDSE GRTPLHWAID RGHLNVAEAL VDKNADVNAK DNEGQTSLHY AVVCEREALA 300
  301 EFLVKQKADT TIKDEDGNSP LDLCESEWSW MREKKDSN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.522879
Match: 1n11A
Description: Ankyrin-R
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle