| Protein: | PNSL1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 238 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PNSL1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
274.0 | [0..7] | [235..3] |
|
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273.0 | [0..7] | [235..4] |
|
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267.0 | [0..9] | [235..1] |
|
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263.0 | [0..7] | [235..4] |
|
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259.0 | [0..7] | [235..3] |
|
|
256.0 | [0..7] | [235..3] |
|
Region A: Residues: [1-84] |
1 11 21 31 41 51
| | | | | |
1 MAVSSLSIRC GGFSPTISHK TEILCPNPSL KACCLLSSGG KADSSESTYQ KGSGNNWKRR 60
61 QALVGVGTLV ATSIPATLLL AEEI
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.871 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.678 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.630 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.587 | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.523 | a.59.1 | PAH2 domain |
| View | Download | 0.515 | a.4.1 | Homeodomain-like |
| View | Download | 0.508 | a.4.1 | Homeodomain-like |
| View | Download | 0.500 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
|
Region A: Residues: [85-238] |
1 11 21 31 41 51
| | | | | |
1 PKSYSPFVDR EDGYSYYYPS DWREFDFRAH DSAFKDRYLQ LQNVRVRFIP TEKNDIHEVG 60
61 PMEEVVYDLV KHKFAAPNQV ATIYDMKERV EDGKNYYTFE YGLRTPIYAT TSFATVAVGN 120
121 NRYYTLIVGA NERRWRKVKK QLQVVADSLK ILQI
|
| Detection Method: | |
| Confidence: | 52.69897 |
| Match: | 1v2bA |
| Description: | Crystal Structure of PsbP Protein in the Oxygen-Evolving Complex of Photosystem II from Higher Plants |
Matching Structure (courtesy of the PDB): |
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