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View Structure Prediction Details

Protein: ODB2_ARATH
Organism: Arabidopsis thaliana
Length: 483 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ODB2_ARATH.

Description E-value Query
Range
Subject
Range
ODB2_BOVIN - Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitocho...
425.0 [0..7] [483..1]

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Predicted Domain #1
Region A:
Residues: [1-234]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIARRIWRSH RFLRPFSSSS VCSPPFRVPE YLSQSSSSPA SRPFFVHPPT LMKWGGGSRS  60
   61 WFSNEAMATD SNSGLIDVPL AQTGEGIAEC ELLKWFVKEG DSVEEFQPLC EVQSDKATIE 120
  121 ITSRFKGKVA LISHSPGDII KVGETLVRLA VEDSQDSLLT TDSSEIVTLG GSKQGTENLL 180
  181 GALSTPAVRN LAKDLGIDIN VITGTGKDGR VLKEDVLRFS DQKGFVTDSV SSEH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.69897
Match: 1zy8K
Description: The crystal structure of dihydrolipoamide dehydrogenase and dihydrolipoamide dehydrogenase-binding protein (didomain) subcomplex of human pyruvate dehydrogenase complex.
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [235-483]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AVIGGDSVST KASSNFEDKT VPLRGFSRAM VKTMTMATSV PHFHFVEEIN CDSLVELKQF  60
   61 FKENNTDSTI KHTFLPTLIK SLSMALTKYP FVNSCFNAES LEIILKGSHN IGVAMATEHG 120
  121 LVVPNIKNVQ SLSLLEITKE LSRLQHLAAN NKLNPEDVTG GTITLSNIGA IGGKFGSPLL 180
  181 NLPEVAIIAL GRIEKVPKFS KEGTVYPASI MMVNIAADHR VLDGATVARF CCQWKEYVEK 240
  241 PELLMLQMR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 80.522879
Match: 2ihwA
Description: No description for 2ihwA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle