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View Structure Prediction Details

Protein: DIT1_ARATH
Organism: Arabidopsis thaliana
Length: 557 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DIT1_ARATH.

Description E-value Query
Range
Subject
Range
gi|111063706, gi... - gi|169608556|ref|XP_001797697.1| hypothetical protein SNOG_07360 [Phaeosphaeria nodorum SN15], gi|11...
229.0 [0..49] [556..431]

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Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLALSGSC SLAFPLKSRS LSLPRPPSSS LNLTKPLRSL DSRFSLLKSP LPVSLRRRSS  60
   61 TLVKASSTVA SASSSPTPPL VPAPVPWQGA AIKPLLASIA TGLILWFVPV PEGV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [115-244]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TRNAWQLLAI FLATIVGIIT QPLPLGAVAL MGLGASVLTK TLTFAAAFSA FGDPIPWLIA  60
   61 LAFFFARGFI KTGLGNRVAY QFVRLFGSSS LGLGYSLVFS EALLAPAIPS VSARAGGIFL 120
  121 PLVKSLCVAC 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [245-345]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSNVGDGTEH RLGSWLMLTC FQTSVISSSM FLTAMAANPL SANLAFNTIK QTIGWTDWAK  60
   61 AAIVPGLVSL IVVPFLLYLI YPPTVKSSPD APKLAQEKLD K

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [346-557]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPMSKNELI MAATLFLTVG LWIFGAKLGV DAVTAAILGL SVLLVTGVVT WKECLAESVA  60
   61 WDTLTWFAAL IAMAGYLNKY GLIEWFSQTV VKFVGGLGLS WQLSFGILVL LYFYTHYFFA 120
  121 SGAAHIGAMF TAFLSVSTAL GTPPYFAALV LAFLSNLMGG LTHYGIGSAP IFYGANYVPL 180
  181 AKWWGYGFLI SIVNILIWLG VGGAWWKFIG LW

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle