YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|15217445, gi|...
Organism: Arabidopsis thaliana
Length: 356 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15217445, gi|....

Description E-value Query
Range
Subject
Range
gi|5777618 - gi|5777618|emb|CAB53479.1| CAA30376.1 protein [Oryza sativa]
343.0 [0..72] [302..480]

Back

Predicted Domain #1
Region A:
Residues: [1-84]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRTIEIEFD INGPYDSLIR PNISVASLTS RSENNITFDP KIFSSKDANS FRFVTKDLVT  60
   61 LSHHIIRVWI TIRTPVNYST GTKW

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [85-356]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SESARVFTII NSCDQTIWPA ITPGENFNGG GFELKPGQSI VFHAPVGWSG RIWGRTGCKF  60
   61 DSTGTGTCET GSCGSTLKCS ASGKPPASLA EFTLAALDFY DVSLVDGFNL PMSVTPMNGK 120
  121 GNCSVAGCVA DLRPHCPQEL AVKSNGKVIS CRSACDVFDR DEYCCRGVYG NPVVCQPTYY 180
  181 SKIFKQACPT AYSYAYDDPT SIMTCTASDY VISFCSSRFV LFTFLTTSHD YFNYDSNQVS 240
  241 FILDHDFYIY MIYFIHPLLI SYAKVKVIQM QK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.69897
Match: 2i0wA
Description: No description for 2i0wA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle