| Protein: | gi|42567684, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 504 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42567684, gi|....
| Description | E-value | Query Range |
Subject Range |
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675.0 | [0..3] | [504..2] |
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673.0 | [0..3] | [504..2] |
|
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673.0 | [0..3] | [504..2] |
|
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671.0 | [0..3] | [504..2] |
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671.0 | [0..3] | [504..2] |
|
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668.0 | [0..3] | [504..2] |
|
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668.0 | [0..3] | [504..2] |
|
Region A: Residues: [1-185] |
1 11 21 31 41 51
| | | | | |
1 MSSTLLEQTR SNHEEVERLE RLVVEDLQKE PPSSKDRLVQ GHRVRHMIES IMLTTEKLVE 60
61 TYEDKDGAWD DEIAALGGQT ATGTNVFSEF YDRLKEIREY HKRHPSGRLV DANEDYEARL 120
121 KEEPIIAFSG EEGNGRYLDL HDMYNQYINS KFGERVEYSA YLDVFSQPEK IPRKLKLSRQ 180
181 YMKYM
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [186-307] |
1 11 21 31 41 51
| | | | | |
1 EALLEYLVYF FQRTEPLQDL DRILSKVCSD FEEQYADGIV EGLDNELIPS QHTVIDLDYY 60
61 STVEELVDVG PEKLKEALGA LGLKVGGTPQ QRAERLFLTK HTPLEKLDKK HFARPPHNGK 120
121 QN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.266 | N/A | N/A | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.266 | N/A | N/A | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.254 | N/A | N/A | c.59.1 | MurD-like peptide ligases, peptide-binding domain |
| View | Download | 0.248 | N/A | N/A | b.84.2 | Rudiment single hybrid motif |
| View | Download | 0.241 | N/A | N/A | b.34.15 | Description not found. |
| View | Download | 0.232 | N/A | N/A | d.124.1 | Ribonuclease Rh-like |
| View | Download | 0.232 | N/A | N/A | d.124.1 | Ribonuclease Rh-like |
| View | Download | 0.215 | N/A | N/A | a.23.3 | Methane monooxygenase hydrolase, gamma subunit |
| View | Download | 0.215 | N/A | N/A | b.84.2 | Rudiment single hybrid motif |
| View | Download | 0.202 | N/A | N/A | a.47.2 | t-snare proteins |
|
Region A: Residues: [308-378] |
1 11 21 31 41 51
| | | | | |
1 GDAKSTHESE NAKEIALTEA KVKKLCNLLD ETIERTKQNI VKKQSLTYEE MEGEREGEEA 60
61 NTELESDDED G
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.695 | a.46.1 | Methionine synthase domain |
| View | Download | 0.606 | a.7.14 | Description not found. |
| View | Download | 0.568 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.568 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.548 | a.8.11 | Description not found. |
| View | Download | 0.536 | a.280.1 | Description not found. |
| View | Download | 0.513 | a.46.1 | Methionine synthase domain |
| View | Download | 0.447 | a.46.1 | Methionine synthase domain |
| View | Download | 0.446 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.439 | a.8.3 | Families 57/38 glycoside transferase middle domain |
|
Region A: Residues: [379-504] |
1 11 21 31 41 51
| | | | | |
1 LIYNPLKLPI GWDGKPIPYW LYKLHGLGQE FKCEICGNYS YWGRRAFERH FKEWRHQHGM 60
61 RCLGIPNTKN FNEITSIEEA KELWKRIQER QGVNKWRPEL EEEYEDREGN IYNKKTYSDL 120
121 QRQGLI
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| Detection Method: | |
| Confidence: | 1.06 |
| Match: | 1zr9A |
| Description: | Solution Structure of a Human C2H2-type Zinc Finger Protein |
Matching Structure (courtesy of the PDB): |
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