| Protein: | VAP21_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 220 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VAP21_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
237.0 | [0..1] | [220..1] |
|
Region A: Residues: [1-142] |
1 11 21 31 41 51
| | | | | |
1 MTGVGENQLI SIQPDELKFL FELEKQSYCD LKVANKTENY VAFKVKTTSP KKYFVRPNTG 60
61 VIQPWDSCII RVTLQAQREY PPDMQCKDKF LLQSTIVPPH TDVDELPQDT FTKDSGKTLT 120
121 ECKLKVSYIT PSTTQRSSES GA
|
| Detection Method: |  |
| Confidence: | 34.154902 |
| Match: | 2criA |
| Description: | Solution structure of the MSP domain of mouse VAMP-associated proteinA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [143-220] |
1 11 21 31 41 51
| | | | | |
1 TNGDGQSSET ISTIQRLKEE RDAAVKQTQQ LQHELETVRR RRNQRNSGNG LSLKLAAMVG 60
61 LIGLIIGFIL KLTLASPT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
