| Protein: | LFR_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 460 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LFR_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
611.0 | [0..1] | [460..1] |
|
Region A: Residues: [1-460] |
1 11 21 31 41 51
| | | | | |
1 MQKRELGKSG GNSGGSSGPP AKRGRPFGST SANSAAAAAA AAAADAMSPS ALLGPSLLVH 60
61 NSFVEQNNRR IVLALQSGLK SEVTWALNTL TLLSFKEKED IRRDVMPLAK IAGLLDALLL 120
121 IIDDWRDIAL PKDLTRGTRV RTLGTNASVT GFGNEYDALA SIQPPGSGIG SSAAEALGKK 180
181 STGKHQSSQW WMEEDGLFNL DDEGRSEKQM CAIAASNVIR NFSFMPDNEV VMAQHRHCLE 240
241 TVFQCIHDHM TEDEELVTNS LETIVNLAHL MDLRIFSSLK QSYININEKK AVQAVVGILN 300
301 SSVKAWNCAA AELLGRLIIN PDNEPFISPL IPQIHKRLID LLSIQAVDAQ AAAVGALYNL 360
361 VEVNMDCRLK LASERWAVDR LLKVIKTPHP VPEVCRKAAM ILENLVSEPQ NRGLLLAYEN 420
421 AFAELLFQEG KYSDSFARIL YELTARSNSR VASARGIWGM
|
| Detection Method: |  |
| Confidence: | 2.55 |
| Match: | 1wa5B |
| Description: | Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.267627928716605 | bayes_pls_golite062009 |
