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View Structure Prediction Details

Protein: FH11_ARATH
Organism: Arabidopsis thaliana
Length: 884 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FH11_ARATH.

Description E-value Query
Range
Subject
Range
gi|6691125 - gi|6691125|gb|AAF24497.1|AF213696_1 FH protein NFH2 [Nicotiana tabacum]
434.0 [0..70] [882..14]

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Predicted Domain #1
Region A:
Residues: [1-234]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVYFRQIFLM IIVVSLHCCK VRFFCIVANA KELDDWKVLT VENGERYRTH VGRYAGEEGG  60
   61 EKIKLRVLEK FRALLDLIKP STSRRRNLAE SASFSPWPAP SPSPFPNGGP IESPAYPPAP 120
  121 PRPIPPHLRR PLPQRTHPLE QPEIQRRKHE KGGTFKKILV PVVASTASAI GFVVCVVGVF 180
  181 CLCARRKRKM NGKTLSFKRK KGKSQSSTRK VSVNPTLDFL YLNSLGVDLE RQNS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [235-454]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSVKEIRETE KDLNGINGGL LEEEVKRSIE TEISHDWDNA SSYSTKEIVS VHENDEEQTV  60
   61 NSVSVPVVVI NDSSDDDESF HSVGGGSQYS NPRLSNASSA SGSVNVGSSQ RFSEHKLDIP 120
  121 ECSRSDFGIS VSAPPPPPPP PPPLPQFSNK RIHTLSSPET ANLQTLSSQL CEKLCASSSK 180
  181 TSFPINVPNS QPRPPPPPPP PQQLQVAGIN KTPPPPLSLD 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [455-884]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FSERRPLGKD GAPLPKLKPL HWDKVRATPD RTMVWDKLRT SSFELDEEMI ESLFGYTMQS  60
   61 STKNEEGKSK TPSPGKHLLE PKRLQNFTIL LKALNATADQ ICSALGKGEG LCLQQLEALV 120
  121 KMVPTKEEEL KLRSYKGAVD ELGSAEKFLR ALVGVPFAFQ RAEAMLYRET FEDEVVHLRN 180
  181 SFSMLEEACK ELKSSRLFLK LLEAVLKTGN RMNVGTIRGG AKAFKLDALL KLSDVKGTDG 240
  241 KTTLLHFVVQ EISRSEGIRV SDSIMGRIMN QRSNKNRTPE EKEEDYRRMG LDLVSGLNTE 300
  301 LRNVKKTATI DLEGLVTSVS NLRDGLGQLS CLASEKLKGD EENRAFVSSM SSFLRYGEKS 360
  361 LEELREDEKR IMERVGEIAE YFHGDVRGDE KNPLRIFVIV RDFLGMLDHV CRELRCVRVP 420
  421 NSPSPLAPFR 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 105.0
Match: 2j1dG
Description: No description for 2j1dG was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle