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View Structure Prediction Details

Protein: GGH1_ARATH
Organism: Arabidopsis thaliana
Length: 348 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GGH1_ARATH.

Description E-value Query
Range
Subject
Range
GUAA_METFK - GMP synthase [glutamine-hydrolyzing] OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 68...
242.0 [0..66] [348..1]

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Predicted Domain #1
Region A:
Residues: [1-348]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIDNNCLYKE ELNRNSYSGL AKEASESILL PSESGFDGSR SPVCSSPDPN LNYRPVIGIL  60
   61 SHPGDGASGR LTNDTSSTYI AASYVKFAEA GGARVIPLIY NEPEEVLFQK LELVNGVIFT 120
  121 GGWAKKYDYF EIVKKIFTKA LERNDAGEHF PVYGICLGFE LMSIIISQNR DILERFDAED 180
  181 NASSLQFVDN VNNDGTLFQR FPPELLKKLS TDCLVMQKHK YGITPANFQA NPALSSFFEI 240
  241 LTTCIDENSK TYVSTVKAKR YPITGFQWHP EKNAFEWGSS AIPHSEDAIQ VTQHAASYLV 300
  301 SEARKSLNRP ESQKVLSNLI YNYKPTYCGY AGRGYDEVYI FTQPRSRF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.221849
Match: 1l9xA
Description: gamma-glutamyl hydrolase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ligase activity 1.70348758031146 bayes_pls_golite062009
catalytic activity 1.30391542469987 bayes_pls_golite062009
binding 0.245374211061945 bayes_pls_golite062009
anthranilate synthase activity 0.243205818526006 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle