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View Structure Prediction Details

Protein: BAH1_ARATH
Organism: Arabidopsis thaliana
Length: 335 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BAH1_ARATH.

Description E-value Query
Range
Subject
Range
gi|21618082 - gi|21618082|gb|AAM67132.1| unknown [Arabidopsis thaliana]
214.0 [0..1] [330..1]
BAHL1_ORYSJ - Probable E3 ubiquitin-protein ligase BAH1-like 1 OS=Oryza sativa subsp. japonica GN=Os03g0650900 PE=...
BAHL1_ORYSI - Probable E3 ubiquitin-protein ligase BAH1-like 1 OS=Oryza sativa subsp. indica GN=OsI_12825 PE=3 SV=...
177.0 [0..1] [328..1]
gi|92878435 - gi|92878435|gb|ABE85047.1| Zinc finger, RING-type; SPX, N-terminal [Medicago truncatula]
168.0 [0..1] [335..1]
gi|56682689 - gi|56682689|gb|AAW21736.1| recombination activating gene 1 [Dermatemys mawii]
139.0 [0..29] [325..41]
gi|213494418, gi... - gi|56682683|gb|AAW21733.1| recombination activating gene 1 [Chelydra serpentina], gi|213494418|gb|AC...
139.0 [0..16] [325..28]
gi|18845862 - gi|18845862|gb|AAL18108.1| recombination activating protein 1 [Dicrurus adsimilis]
138.0 [0..35] [326..54]

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Predicted Domain #1
Region A:
Residues: [1-140]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFCKKYEEY MQGQKEKKNL PGVGFKKLKK ILKRCRRNHV PSRISFTDAI NHNCSRECPV  60
   61 CDGTFFPELL KEMEDVVGWF NEHAQKLLEL HLASGFTKCL TWLRGNSRKK DHHGLIQEGK 120
  121 DLVNYALINA VAIRKILKKY 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 19.142668
Match: PF03105.10
Description: No description for PF03105.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [141-335]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DKIHESRQGQ AFKTQVQKMR IEILQSPWLC ELMAFHINLK ESKKESGATI TSPPPPVHAL  60
   61 FDGCALTFDD GKPLLSCELS DSVKVDIDLT CSICLDTVFD PISLTCGHIY CYMCACSAAS 120
  121 VNVVDGLKTA EATEKCPLCR EDGVYKGAVH LDELNILLKR SCRDYWEERR KTERAERLQQ 180
  181 AKEYWDYQCR SFTGI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.522879
Match: 2qizA
Description: No description for 2qizA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle