| Protein: | SMU2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 585 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SMU2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
568.0 | [0..1] | [559..1] |
|
|
324.0 | [0..2] | [328..15] |
|
|
300.0 | [0..4] | [254..19] |
|
|
298.0 | [0..1] | [328..64] |
|
|
296.0 | [0..2] | [328..66] |
|
|
293.0 | [0..2] | [248..74] |
|
|
291.0 | [0..2] | [328..69] |
|
|
289.0 | [0..1] | [386..68] |
|
Region A: Residues: [1-133] |
1 11 21 31 41 51
| | | | | |
1 MKPSKSHHKE KTARRREEKL EESDNPKYRD RAKERRENQN PDYDPSELSS FHAVAPPGAV 60
61 DIRAADALKI SIENSKYLGG DVEHTHLVKG LDYALLNKVR SEIVKKPDGE DGDGGKTSAP 120
121 KEDQRVTFRT IAA
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [134-267] |
1 11 21 31 41 51
| | | | | |
1 KSVYQWIVKP QTIIKSNEMF LPGRMTFVYD MEGGYTHDIP TTLYRSKADC PVPEEFVTVN 60
61 VDGSVLDRIA KIMSYLRLGS SGKVLKKKKK EKDGKGKMST IANDYDEDDN KSKIENGSSV 120
121 NISDREVLPP PPPL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [268-452] |
1 11 21 31 41 51
| | | | | |
1 PPGINHLDLS TKQEEPPVAR TDDDDIFVGE GVDYTVPGKD VTQSPISEDM EESPRDKEKV 60
61 SYFDEPAYGP VQEKVPYFAE PAYGPVQPSA GQEWQDMSAY GAMQTQGLAP GYPGEWQEYQ 120
121 YAEQTGYQEQ YLQPGMEGYE VQPETDVLLD PQLMSQEEKD RGLGSVFKRD DQRLQQLRES 180
181 DAREK
|
| Detection Method: | |
| Confidence: | 4.045757 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [453-585] |
1 11 21 31 41 51
| | | | | |
1 DPTFVSESYS ECYPGYQEYN HEIVGSDEEP DLSKMDMGGK AKGGLHRWDF ETEEEWEKYN 60
61 EQKEAMPKAA FQFGVKMQDG RKTRKQNRDR DQKLNNELHQ INKILTRKKM EKEGGDVASL 120
121 DAAEAQTPKR SKH
|
| Detection Method: | |
| Confidence: | 95.853872 |
| Match: | PF07807.2 |
| Description: | No description for PF07807.2 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
