| Protein: | gi|4582448, gi|2... |
| Organism: | Arabidopsis thaliana |
| Length: | 556 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|4582448, gi|2....
| Description | E-value | Query Range |
Subject Range |
|
|
498.0 | [0..123] | [555..6] |
|
Region A: Residues: [1-130] |
1 11 21 31 41 51
| | | | | |
1 MCFDLDNVFA GDPFLCSQPR KCLTTNLNMS RTRQGHSIQM NRRHLLMKER KSFSINYSDK 60
61 FRDDSMSSEE MHTDALDVEI IPPDSQDIRN SQNSAVSNTL QDDRPKSFRN RFLDFVRISS 120
121 VLNTAAERFF
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [131-556] |
1 11 21 31 41 51
| | | | | |
1 KSEIRRRLFV TAVLLVLSRV GYFIPLPGFD RRLIPQDYLS FVSGSVGECS HFGAEIKLSL 60
61 FQLGLSPQII ASIIMQVLCH VLPSLVKLRK EGLDGHEKIK SYMCMVAIVF LRYSGSISGG 120
121 LHFSSIFSFC SHCPHVMMTS SLLVCGAMTM TWLCDTISES GFGHGSSLII CVGILTGYTE 180
181 TLHKMLNQIS GSFSNWLPYL LGLLGIFTVV TMFAVVVTEG CRKIKLQYYG FKLASASREG 240
241 SPITEVEPYI PFNINPAGMQ PVLTTTYLLA FPSILASILG SPFLLNMKEI LNPESTVGAP 300
301 PWVYYSIYAF FVFLFNIFDI ANLPKEIADY LNKMGARIPN IKPGKATIEY LTKIQASTRF 360
361 WGGLLLSFLA TASTVLDHYL RSINQGFSIG FTSVLIIVGS IIELRRSYHA YNVMPSLSKA 420
421 LKRYGV
|
| Detection Method: | |
| Confidence: | 112.0 |
| Match: | 2akhY |
| Description: | Normal mode-based flexible fitted coordinates of a non-translocating SecYEG protein-conducting channel into the cryo-EM map of a SecYEG-nascent chain-70S ribosome complex from E. coli |
Matching Structure (courtesy of the PDB): |
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