| Protein: | PTR50_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 552 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PTR50_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
331.0 | [0..2] | [542..19] |
|
Region A: Residues: [1-459] |
1 11 21 31 41 51
| | | | | |
1 MAGGEKRRGL SKSCALLIVI AGIERYAFKG VASNLVTYLT DVVKMSNSRA ATTVNTWSGF 60
61 TFMLPLFSAP FADSYWDRFF TILASSSLYF VGLVGLTFTA FAGSRSTTKT ISLYFLYTSL 120
121 SLVALGLGVL NPSLQAFGAD QLDYDLDHDN DHEPSSENKE VKSNRKTQFF QWWYFGVCAG 180
181 SLLGVTVMAY IQDTFGWVIG FAIPTASMLL LIFLFLCGCG VYVYADPDLK AKPFQRILEI 240
241 IKERVCGRNK ITLVNDHDLN AMELELQDQK PLCNCSNTEA NTTTKSLPDD HKSCKTGFSG 300
301 LETVKLLLRL LPIWTMLLMF AVIFQQPATF FTKQGMTMKR NIGPNFKIPP ATLQSTITLS 360
361 IILLMPFYDK ILIPIAKKLT KNEKGISVKE RMGIGMFLSI IAIVIAALVE RKRLKISKMM 420
421 KTTPNLDPVS ILWLLPQYIL LGISDIFTVV GMQEFFYSE
|
| Detection Method: |  |
| Confidence: | 4.221849 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.3426261924492 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.29689809004391 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.15783210522667 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 1.94035843948137 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.5181741634556 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| binding | 0.772207656683716 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
|
Region A: Residues: [460-552] |
1 11 21 31 41 51
| | | | | |
1 VPVSMRTMGF ALYTSVFGVG SFVSAALISI IETYTSSRGG KHNWFADDMS EARLDNYYWL 60
61 LAFTSAISFL MYIVICKHFK SRSDDDDQCD TNC
|
| Detection Method: | |
| Confidence: | 0.952 |
| Match: | 2v8nA |
| Description: | No description for 2v8nA was found. |
