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View Structure Prediction Details

Protein: gi|6850887, gi|2...
Organism: Arabidopsis thaliana
Length: 188 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6850887, gi|2....

Description E-value Query
Range
Subject
Range
gi|34104509, gi|... - gi|34498656|ref|NP_902871.1| hypothetical protein CV_3201 [Chromobacterium violaceum ATCC 12472], gi...
126.0 [0..21] [182..1]

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Predicted Domain #1
Region A:
Residues: [1-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNWAKFRETG SPEDTDMSST PISSDTTAVS KVIDPNYVLM VADFFKAISP DESCNDFTSF  60
   61 DSFSVLFQNN TRALSIARGR VSCSVTVTPG ISNFFKGLHG GAVASIAERV AMACVKTVVS 120
  121 EDKHLFIGEL SMSYLSSAPI SSELLVEGTV VRTGRNLSVV TVEFKIKETM KVTYLSRATF 180
  181 YHSPISKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.69897
Match: 2b6eA
Description: X-Ray structure of the different crystal form of the hypothetical UPF0152 protein HI1161: NESG target IR63
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.215996736903871 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle