| Protein: | Y2424_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 441 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y2424_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
451.0 | [0..1] | [441..1] |
|
Region A: Residues: [1-259] |
1 11 21 31 41 51
| | | | | |
1 MGISKDRIKF NVGGRLFETT ATTLANAGRD SFFGALFDDE WNLSPLEDSI LFVDRNSDCF 60
61 AVLLDLLRTG DLNVPANIPE RLLHREASFY GLLDHVRTAK WGPFDGNRLR LSDSVKGIAP 120
121 GDGTAIRAGP DGGCCVAHGS VVHVFDWMLE EHSPINLDYQ RVNDVGWIDS DNIVLSACEK 180
181 LGRGDGGMGL FSSSSGDLRY KFQVCHENQV KSYTAGALSF SPDYEIFASC KGRSNEYGIG 240
241 VWDQITGKQT DFFYESPGW
|
| Detection Method: |  |
| Confidence: | 48.0 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [260-441] |
1 11 21 31 41 51
| | | | | |
1 SLGDADKLQW LNGKNCLLVA TLFPRKDNCY ISLLDFRDKN MVWSWSDIGS PMAIDEKRVR 60
61 DAIAMEDSNS ICVVNEFEDL GFIDLRMYGG SVRWSSRSKL MKSKMPDEPC YPKLALHEGQ 120
121 LFSSMNDSIS VFCGPDWVLT SRLRRSYGGS ICDFSIGGDR LFALHSEENV FDVWETPPCP 180
181 II
|
| Detection Method: | |
| Confidence: | 1.08 |
| Match: | 2fawA |
| Description: | No description for 2fawA was found. |
