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View Structure Prediction Details

Protein: gi|25308573, gi|...
Organism: Arabidopsis thaliana
Length: 615 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25308573, gi|....

Description E-value Query
Range
Subject
Range
gi|222615549, gi... - gi|222615549|gb|EEE51681.1| hypothetical protein OsJ_33035 [Oryza sativa Japonica Group], gi|2156947...
gi|218185284 - gi|218185284|gb|EEC67711.1| hypothetical protein OsI_35189 [Oryza sativa Indica Group]
604.0 [0..1] [599..40]

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Predicted Domain #1
Region A:
Residues: [1-615]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLLKPTTLS KSSKVGPQQQ QGFSESLIGD SVEAADAFIC QWVTPHLCDS SSSSCSLSSL  60
   61 FSAQNRLEGR RFLEVLGKLQ YAIQSTVAMN PDSAKLAKGQ DLMRKAMKHL EKEFYRVLKS 120
  121 NRRFLSPESV SGWSSESNIP SRSSGTASDS SSDGELYSES SSELGKDIGG GGNSDAIVDL 180
  181 KMIANCMISS GYEKDCVKIY KKFRKKIIVD TLSHLGFEKL TSTQMQKLEW EILEKKIKIW 240
  241 VIVARVAITT LFNGERILSD HIFSSSVAES CFVDITLQSA LNLFIFSLTV AKSRKTAEKI 300
  301 FPTLDVYQTI LQLTPKIDQI FSYDSTAAVR LQANESLEKL SESVNAMMTE FQSSITKESS 360
  361 KSAISGGGVH QLTRYVMNFI VFLADYSDSL ATILKESSLP LPEDYFSSSG EENPGSGDRS 420
  421 PMAARLAWLI LVLLCKIDAK SRLYNDSALS YLFLANNLHY VVTKVRTSNL RLVLGDDWVA 480
  481 NHEVKVNQYL EKYEKMAWGD VIASLPGDST AGTEAEESLR RFNEAFEEAY KKHKTWVVPD 540
  541 PNLRDEIQAS IARKLMPGYT GFYKKHPVGS CNIVRFTPED LNNYITDLYV GLGRSVPVSK 600
  601 TKKYMVSPSH TTDLK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 122.0
Match: 2pftA
Description: No description for 2pftA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle