| Protein: | gi|25406686, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 516 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25406686, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
535.0 | [0..2] | [515..1190] |
|
Region A: Residues: [1-90] |
1 11 21 31 41 51
| | | | | |
1 MATEYERKRL ENIRRNDEML AALNVRAKAS SLLSAAKRSR DDSKSFKKKK PKPASTPTVI 60
61 RMSLRTRGLN PDSAGLPDGF SDFRMGSQIT
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [91-516] |
1 11 21 31 41 51
| | | | | |
1 HNQPSPQKQS PRLLAPIPFE SAYEGYGSYT QLVDTLLGIE SKSCRGKLVK GEIGVVKDEN 60
61 ESPMVRTRSS SRVSKVSVKK EEPEDDSFSD YVNKEFSIPV KPEKIEFDLD LLTLEPQNVA 120
121 RVVPGRIFVV QFLPCENVKM VAAGDKLGNV GFWNLDCGNE EDNDGIYLFT PHSAPVSSIV 180
181 FQQNSLSRVI SSSYDGLIRL MDVEKSVFDL VYSTDEAIFS LSQRPNDEQS LYFGQDYGVF 240
241 NVWDLRAGKS VFHWELHERR INSIDFNPQN PHVMATSSTD GTACLWDLRS MGAKKPKTLS 300
301 TVNHSRAVHS AYFSPSGLSL ATTSLDNYIG VLSGANFENT CMIYHNNTSR WISKFKAVWG 360
361 WDDSYIYVGN LSKKIDVINP KLKRTVMELH NPLQRAIPCR IHCHPYNVGT LAGSTAGGQV 420
421 YVWTTK
|
| Detection Method: | |
| Confidence: | 43.69897 |
| Match: | 1nexB |
| Description: | Cdc4 F-box and linker domains; Cdc4 propeller domain |
Matching Structure (courtesy of the PDB): |
|
