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View Structure Prediction Details

Protein: gi|21592816, gi|...
Organism: Arabidopsis thaliana
Length: 434 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21592816, gi|....

Description E-value Query
Range
Subject
Range
gi|17978679, gi|... - gi|17978679|gb|AAL47333.1| anthranilate N-hydroxycinnamoyl/benzoyltransferase-like protein [Arabidop...
299.0 [0..1] [434..1]

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Predicted Domain #1
Region A:
Residues: [1-434]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEELVVISK SIVNPRSLKK PTSVKKIQLT PWDLSRLRFG YLQRGLLFHK IEVKQLQASL  60
   61 SVALDRFYPL AGRLVKLKND DDTVSFFISC DGSGVEFVHA VAKNIELSDV LELSGSVPGF 120
  121 FASFFPATGI KNYHGVSRSL LMVQVTEMKD GVFIGFGYNS TVADATSIWK FINAWSEICS 180
  181 KDSSGSQTFQ RRLHLKGWFF DEIDYPIHIP DPETKPTSYV TTPTNLQEKM FHVTKENVLK 240
  241 LDAKANDEAD QKISSIQAVL AYIWRSMVKH SGMSREEETH CRLPINMRQR LNPPLEEECF 300
  301 GNVSQTGIAT VTVGELLDHG LGWAAMQINN MELSQTDEKA KAFAENWVKN IKIPVSVGSK 360
  361 DLVVTNSHRF DVYCNDFGWG KPIAARAGPP YLNGRLVVFK GIGEASLDFQ ACLLPQVVEK 420
  421 LVKDAEFNEY VSIV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.522879
Match: 2bghA
Description: Crystal structure of Vinorine Synthase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle