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View Structure Prediction Details

Protein: gi|15241531, gi|...
Organism: Arabidopsis thaliana
Length: 326 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15241531, gi|....

Description E-value Query
Range
Subject
Range
gi|50758242 - gi|50758242|ref|XP_415827.1| PREDICTED: similar to myosin 18A isoform a; myosin 18A; myosin containi...
150.0 [0..3] [321..2127]

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Predicted Domain #1
Region A:
Residues: [1-326]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYEQQQHFMD LQSDSGFGDD SSWLAGDDDL RLSPHQSAAG TNSGNENLDR RLLKDLVEMV  60
   61 PLIEHYMEHK ERSSFKRRGS MIYTKMPSKE SLSRRGRNAS QTVPGRKKRD QEGNDDVMNN 120
  121 SREDDENAKA LAGAEKEEMS RLREQVNDLQ TKLSEKEEVL KSMEMSKNQV NEIQEKLEAT 180
  181 NRLVAEKDML IKSMQLQLSD TKIKLADKQA ALEKTQWEAK TTGTRAIKLQ EQLDAVEGDI 240
  241 STFTRVFETL AKTDSKKPDR DYDAVPYEFD HLPYLDDVDE TDLRKMEEAR LAYVAAVNTA 300
  301 KEREDEESLV MAAQARAYLQ SLAFTY

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Detection Method: PSI-BLAST
Confidence: 19.045757
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle