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View Structure Prediction Details

Protein: GDL83_ARATH
Organism: Arabidopsis thaliana
Length: 372 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL83_ARATH.

Description E-value Query
Range
Subject
Range
gi|42562378 - gi|42562378|ref|NP_174179.2| carboxylic ester hydrolase/ hydrolase, acting on ester bonds / lipase [...
369.0 [0..1] [372..1]

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Predicted Domain #1
Region A:
Residues: [1-372]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRINMLFIVA FSFLVSVRSL PMRPTLKYES IFNFGDSLSD TGNFLLSGDV DSPNIGRLPY  60
   61 GQTFFNRSTG RCSDGRLIID FIAEASGLPY IPPYLQSLRT NDSVDFKRGA NFAVAGATAN 120
  121 EFSFFKNRGL SVTLLTNKTL DIQLDWFKKL KPSLCKTKPE CEQYFRKSLF LVGEIGGNDY 180
  181 NYPLLAFRSF KHAMDLVPFV INKIMDVTSA LIEEGAMTLI VPGNLPIGCS AALLERFNDN 240
  241 SGWLYDSRNQ CYMPLNNLAK LHNDKLKKGL AALRKKYPYA KIIYADYYSS AMQFFNSPSK 300
  301 YGFTGSVLKA CCGGGDGRYN VQPNVRCGEK GSTTCEDPST YANWDGIHLT EAAYRHIATG 360
  361 LISGRFTMPT YN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.21
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.471286748048633 bayes_pls_golite062009
catalytic activity 0.319044203629006 bayes_pls_golite062009
protein binding 0.0277911089352154 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle